GeneMark Manual Universal gene prediction program – predicts protein-coding regions, in genomes of any type.
MkMat Manual Model building tool for GeneMark. Makes matrices from sample protein-coding and non-coding sequences selected by the user.
Prokaryotic GeneMark.hmm Manual Predicts genes in prokaryotic genomes. Leaves less room for expert than GeneMark
Eukaryotic GeneMark.hmm Manual Gene prediction program – predicts protein-coding regions in eukaryotic genomes. (exon-intron structures)

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