GeneMark.hmm Manual
(eukaryotic)









Return to GeneMark.hmm (Eukaryotic)

Comparison of GeneMark.hmm gmhmmp

Examples demonstrate the quality of gene prediction based on the comparison of GenBank annotated sequences with the last version GeneMark.hmm, the web server program GENSCAN(Chris Burge, Stanford University) and the web server program FGENESH (Victor Soloviev, Sanger Center).

Example 1.

Summary data on gene prediction for human sequence AF023268 -
Length 75270 bp; G+C= 52.27%; 6 annotated genes; 70 annotated exons;

Example 2.

Summary data on gene prediction for human sequence HUMBRCA1 -
Length 117143 bp; G+C=45.81%; 5 annotated genes; 39 annotated exons;

Example 3.

Summary data on gene prediction for A.thaliana sequence AC002337-
Length: 88068 bp; G+C content: 36.84%; 25 annotated genes; 134 annotated exons.



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