GeneMark Manual














Return to GeneMark

Matrix Information Utility matinfo

The utility matinfo simply displays text embedded in the transition matrices used by GeneMark. This information may be useful while cataloging matrix files or to get other information that may be stored in the matrix file.

The general syntax for the matinfo command is:

matinfo matrix1 [ matrix2 ... ]

For example:

$ matinfo ecoli_4.mat subt_4.mat

$ matinfo ecoli_4.mat
/usr/local/share/matrices/ecoli_4.mat:
Name = E. coli (NCBI/FR-1), Order - 4
Author = JDM (Amiga-TransMatrix)
Order = 4


$ matinfo subt_4.mat
/usr/local/share/matrices/subt_4.mat:
Name = Bacillus subtilis - DATE: 09/08/95 Time: 09:11:36
Author = wsh/MB
Order = 4


previous: GeneMark %GC Content
next: GeneMark Matrix Viewer




Gene Probe, Inc.
1106 Wrights Mill Court
Atlanta, GA 30324

PH: +1 (404) 579 - 2975
FX: +1 (404) 255 - 2067

Technical Support
Licensing Support